Shortcuts

Notebooks

Jupyter Notebooks are a convenient way to develop and debug machine learning models, visualize the behavior of trained models, or even manage the training lifecycle of a model manually. Determined makes it easy to launch and manage notebooks.

Determined will schedule a Jupyter notebook in a containerized environment on the cluster and proxy HTTP requests to and from the notebook container through the Determined master. The lifecycle management of Jupyter notebooks in Determined is left up to the user—once a Jupyter notebook has been scheduled onto the cluster, it will remain scheduled indefinitely until the user explicitly shuts down the notebook. Once a notebook has been terminated, it is not possible to reactivate it. However, new notebooks can easily be configured to restore the state of a previous notebook—see Saving and Restoring Notebook State for more information.

Working with Notebooks

There are two ways to access notebooks in Determined: the command-line interface (CLI) and the WebUI. To install the CLI, see Install Determined CLI.

Command Line

The following command will automatically start a notebook with a single GPU and open it in your browser.

det notebook start

The --context option adds a folder or file to the notebook environment, allowing its contents to be accessed from within the notebook.

det notebook start --context folder/file

The --config-file option can be used to create a notebook with an environment specified by a configuration file.

det notebook start --config-file config.yaml

For more information on how to write the notebook configuration file, see Notebook Configuration.

Warning

In Determined, notebook state is not persistent by default. If a failure occurs (e.g., the agent hosting the notebook crashes), the content of the notebook will not be saved. To ensure that notebook state is persisted, refer to Saving and Restoring Notebook State for more information.

Other Useful Commands

A full list of notebook commands can be found by running:

det notebook --help

To view all running notebooks:

det notebook list

To kill a notebook, you need its ID, which can be found using the list command.

det notebook kill <id>

WebUI

Notebooks can also be started from the WebUI. You can click the “Tasks” tab to take you to a list of the tasks currently running on the cluster.

../_images/task-list@2x.jpg

From here, you can find running notebooks. You can reopen, kill, or view logs for each notebook.

To create a new notebook, click “Launch Notebook”. If you would like to use a CPU-only notebook, click the dropdown arrow and select “Launch CPU-only Notebook”.

../_images/launch-cpu-notebook@2x.jpg

Notebook Configuration

Notebooks may be supplied an optional notebook configuration to control aspects of the notebook’s environment. For example, to launch a notebook that uses two GPUs:

$ det notebook start --config resources.slots=2

In addition to the --config flag, configuration may also be supplied via a YAML file (--config-file):

$ cat > config.yaml <<EOL
description: test-notebook
resources:
  slots: 2
bind_mounts:
  - host_path: /data/notebook_scratch
    container_path: /scratch
EOL
$ det notebook start --config-file config.yaml

See Determined Task Configuration for details on the supported configuration options.

Finally, to configure notebooks to run a predefined set of commands at startup (as with experiments), you can include a --context option:

$ mkdir my_context_dir
$ echo "pip3 install pandas" > my_context_dir/startup-hook.sh
$ det notebook start --context my_context_dir

Example: CPU-Only Notebooks

By default, each notebook is assigned a single GPU. This is appropriate for some uses of notebooks (e.g., training a deep learning model) but unnecessary for other tasks (e.g., analyzing the training metrics of a previously trained model). To launch a notebook that does not use any GPUs, set resources.slots to 0:

$ det notebook start --config resources.slots=0

Saving and Restoring Notebook State

Warning

It is only possible to save and restore notebook state on Determined clusters that are configured with a shared filesystem available to all agents.

To ensure that your work is saved even if your notebook gets terminated, it is recommended to launch all notebooks with a shared filesystem directory bind-mounted into the notebook container and work on files inside of the bind mounted directory. For example, a user jimmy with a shared filesystem home directory at /shared/home/jimmy could use the following configuration to launch a notebook:

$ cat > config.yaml << EOL
bind_mounts:
  - host_path: /shared/home/jimmy
    container_path: /shared/home/jimmy
EOL
$ det notebook start --config-file config.yaml

Working on a notebook file within the shared bind mounted directory will ensure that your code and Jupyter checkpoints are saved on the shared filesystem rather than an ephemeral container filesystem. If your notebook gets terminated, launching another notebook and loading the previous notebook file will effectively restore the session of your previous notebook. To restore the full notebook state (in addition to code), you can use Jupyter’s File > Revert to Checkpoint functionality.

Note

By default, JupyterLab will take a checkpoint every 120 seconds in an .ipynb_checkpoints folder in the same directory as the notebook file. To modify this setting, click on Settings > Advanced Settings Editor and change the value of "autosaveInternal" under Document Manager.